Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | IM33_01070 | P17211 | + | 183076 - 183777 | 26876.3 |
| flagellar protein | IM33_01075 | Not Available | + | 183793 - 184215 | 16400.0 |
| flagellar protein | IM33_01080 | Not Available | + | 184200 - 184385 | 6858.86 |
| flagellar basal body rod protein flgg | IM33_01085 | P39752 | + | 184427 - 185200 | 28114.1 |
| flagellar basal body rod protein flgg | IM33_01090 | O51715 | + | 185221 - 185982 | 27860.5 |
| flagellar motor switch protein flim | IM33_01095 | Not Available | + | 186005 - 186886 | 33118.6 |
| flagellar motor switch protein flin | IM33_01100 | P24073 | + | 186889 - 187263 | 13696.5 |
| hypothetical protein | IM33_01105 | Not Available | + | 187295 - 188695 | 53875.7 |
| molecular chaperone hsp90 | IM33_01110 | P0CJ84 | + | 188810 - 190750 | 75065.3 |
| alcohol dehydrogenase | IM33_01115 | P71017 | + | 191136 - 192266 | 41064.6 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.