Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_00770 | Not Available | - | 123228 - 123443 | 8020.83 |
| hypothetical protein | IM33_00775 | Not Available | + | 123672 - 123902 | 8717.73 |
| n5-carboxyaminoimidazole ribonucleotide mutase | IM33_00780 | Q9UY68 | + | 124217 - 124693 | 17123.2 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | IM33_00785 | B0S341 | + | 124699 - 125397 | 26689.1 |
| amidophosphoribosyltransferase | IM33_00790 | O26742 | + | 125409 - 126776 | 50744.0 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | + | 125843 - 126177 | Not Available |
| phosphoribosylaminoimidazole synthetase | IM33_00795 | A8MLI7 | + | 126770 - 127846 | 38876.0 |
| phosphoribosylglycinamide formyltransferase | IM33_00800 | P43846 | + | 127840 - 128433 | 21686.4 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase | IM33_00805 | Q18CW0 | + | 128426 - 129958 | 57155.3 |
| phosphoribosylamine--glycine ligase | IM33_00810 | Q8RC54 | + | 129969 - 131219 | 45689.9 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.