Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein | IM33_00720 | Not Available | - | 110205 - 113633 | 129434.0 |
| diguanylate phosphodiesterase | IM33_00725 | P21514 | + | 114062 - 116305 | 85952.0 |
| transcription antiterminator bglg | IM33_00730 | Not Available | + | 116566 - 118596 | 78747.6 |
| pts fructose transporter subunit iia | IM33_00735 | Not Available | + | 118593 - 119045 | 16983.4 |
| pts fructose transporter subunit iic | IM33_00740 | Not Available | + | 119047 - 119923 | 30262.5 |
| pts fructose transporter subunit iic | IM33_00745 | P32672 | + | 119924 - 120200 | 9819.17 |
| pts fructose transporter subunit iib | IM33_00750 | Not Available | + | 120264 - 120572 | 11264.7 |
| sugar-phosphate kinase | IM33_00755 | Not Available | + | 120676 - 121941 | 47958.2 |
| hydrolase | IM33_00760 | P94512 | + | 122029 - 122760 | 28462.1 |
| spore coat protein | IM33_00765 | Not Available | - | 122929 - 123222 | 10844.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.