Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| regulator | IM33_04820 | Not Available | + | 1006694 - 1007398 | 27225.9 |
| histidine kinase | IM33_04825 | Not Available | + | 1007400 - 1008887 | 56846.0 |
| diguanylate cyclase | IM33_04830 | Q8EGF8 | + | 1009090 - 1010703 | 62075.6 |
| caax protease | IM33_04840 | Not Available | - | 1011503 - 1012465 | 36764.4 |
| hypothetical protein | IM33_04845 | Not Available | + | 1012631 - 1012966 | 13114.8 |
| hypothetical protein | IM33_04850 | P00476 | + | 1013075 - 1014148 | 40534.6 |
| hypothetical protein | IM33_04855 | Not Available | + | 1014228 - 1014449 | 8514.47 |
| hypothetical protein | IM33_04860 | Not Available | + | 1014446 - 1015441 | 38630.9 |
| hypothetical protein | IM33_04865 | Not Available | + | 1015452 - 1015742 | 11384.9 |
| hypothetical protein | IM33_04875 | Not Available | + | 1015968 - 1016297 | 13083.2 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.