Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase | IM33_04770 | O34962 | + | 995060 - 996241 | 42615.9 |
| transcriptional regulator | IM33_04775 | Not Available | + | 996415 - 996678 | 10082.0 |
| transcriptional regulator | IM33_04780 | P37478 | + | 997197 - 997880 | 26175.8 |
| histidine kinase | IM33_04785 | P94414 | + | 997891 - 999132 | 47612.9 |
| peptide abc transporter atp-binding protein | IM33_04790 | Q32EX7 | + | 999205 - 999888 | 25004.3 |
| abc transporter permease | IM33_04795 | Not Available | + | 999885 - 1002209 | 86690.9 |
| dna-binding protein | IM33_04800 | Not Available | - | 1002390 - 1003232 | 31743.9 |
| gntr family transcriptional regulator | IM33_04805 | Q9HU78 | + | 1003527 - 1004261 | 27967.9 |
| n-acetylglucosamine-6-phosphate deacetylase | IM33_04810 | O34450 | + | 1004271 - 1005404 | 41633.2 |
| glucosamine-6-phosphate deaminase | IM33_04815 | Q18AL0 | + | 1005472 - 1006221 | 27587.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.