Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-phosphoglycerate dehydrogenase | IM33_04720 | Q9X1C1 | + | 981559 - 982500 | 34739.3 |
| hypothetical protein | IM33_04725 | Not Available | + | 982532 - 983782 | 48377.8 |
| histidine kinase | IM33_04730 | A0A0H2ZJS2 | + | 984603 - 988151 | 135867.0 |
| hypothetical protein | IM33_04735 | Q8XL46 | + | 988337 - 990271 | 73817.4 |
| abc transporter substrate-binding protein | IM33_04740 | Not Available | + | 990378 - 991373 | 36310.7 |
| abc transporter permease | IM33_04745 | Not Available | + | 991345 - 992130 | 30011.0 |
| abc transporter | IM33_04750 | Q57855 | + | 992118 - 992816 | 27088.2 |
| prolyl-trna synthetase | IM33_04755 | O31650 | + | 992924 - 993397 | 17792.8 |
| fumarate hydratase | IM33_04760 | Q58690 | + | 993593 - 994432 | 30279.0 |
| fumarate hydratase | IM33_04765 | Not Available | + | 994445 - 994993 | 19717.9 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.