Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| multidrug transporter mate | IM33_04670 | Q4L8N9 | + | 969956 - 971323 | 49489.8 |
| 30s ribosomal protein s1 | IM33_04675 | Q97I09 | + | 971523 - 972797 | 48492.0 |
| hydrolase | IM33_04680 | A0PYB3 | + | 972915 - 973634 | 27292.6 |
| hypothetical protein | IM33_04685 | Not Available | + | 973655 - 974101 | 17475.7 |
| 2-isopropylmalate synthase | IM33_04690 | Q97MC5 | + | 974624 - 976366 | 66281.5 |
| 3-isopropylmalate dehydratase | IM33_04695 | Q18AJ2 | + | 976323 - 977624 | 46728.4 |
| 3-isopropylmalate dehydratase | IM33_04700 | Q18AJ1 | + | 977614 - 978105 | 17996.6 |
| 3-isopropylmalate dehydrogenase | IM33_04705 | Q97EE2 | + | 978112 - 979182 | 39445.6 |
| thioesterase | IM33_04710 | Not Available | + | 979356 - 979871 | 19144.9 |
| aminotransferase | IM33_04715 | Q58369 | + | 980244 - 981320 | 40014.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.