Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_04615 | Q18A92 | + | 957499 - 959004 | 56555.1 |
| dna polymerase iv | IM33_04620 | Q18A91 | + | 959407 - 960504 | 41987.5 |
| abc transporter atpase | IM33_04625 | Not Available | + | 960764 - 961900 | 42390.7 |
| abc transporter permease | IM33_04630 | Not Available | + | 961893 - 963440 | 56634.0 |
| cation transporter | IM33_04635 | Q8L725 | + | 963777 - 964643 | 32468.2 |
| aldo/keto reductase | IM33_04640 | Not Available | + | 964784 - 965926 | 43186.8 |
| membrane protein | IM33_04650 | Not Available | + | 966410 - 967648 | 47102.5 |
| phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase | IM33_04655 | Not Available | + | 967677 - 968564 | 33687.4 |
| hydrolase | IM33_04660 | Not Available | + | 968586 - 969212 | 24554.1 |
| membrane protein | IM33_04665 | Not Available | + | 969220 - 969684 | 16646.6 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.