Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | IM33_04565 | O05494 | + | 946857 - 947495 | 24552.3 |
| arginine decarboxylase | IM33_04570 | Not Available | + | 948311 - 949786 | 54428.1 |
| s-adenosylmethionine decarboxylase proenzyme | IM33_04575 | A5IJD2 | + | 949859 - 950272 | 15659.6 |
| spermidine synthase | IM33_04580 | Q18A85 | + | 950302 - 951150 | 32873.2 |
| agmatinase | IM33_04585 | Q81JT1 | + | 951143 - 952021 | 33452.6 |
| cold-shock protein | IM33_04590 | Q45097 | - | 952201 - 952401 | 7452.61 |
| iron hydrogenase | IM33_04595 | Not Available | + | 952868 - 954358 | 54201.6 |
| iron hydrogenase | IM33_04600 | P13629 | + | 954633 - 956135 | 55340.6 |
| hypothetical protein | IM33_04605 | Not Available | + | 956475 - 956666 | 7081.78 |
| hypothetical protein | IM33_04610 | Not Available | + | 956889 - 957239 | 13698.5 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.