Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_00160 | O35010 | - | 22206 - 22426 | 8170.73 |
| hypothetical protein | IM33_00165 | Not Available | + | 23053 - 23412 | 13370.6 |
| xre family transcriptional regulator | IM33_00170 | Not Available | + | 23412 - 23615 | 7843.42 |
| hypothetical protein | IM33_00180 | Not Available | + | 24014 - 24331 | 12190.6 |
| hypothetical protein | IM33_00185 | Not Available | - | 24418 - 24732 | 12082.9 |
| hypothetical protein | IM33_00190 | Not Available | - | 24807 - 25286 | 18924.1 |
| xre family transcriptional regulator | IM33_00200 | O28646 | - | 26373 - 26573 | 7727.52 |
| membrane protein | IM33_00205 | Not Available | - | 26575 - 26925 | 13344.5 |
| capsid protein | IM33_00210 | Not Available | - | 27596 - 28365 | 28479.8 |
| amino acid permease | IM33_00215 | Not Available | - | 28545 - 29894 | 48911.5 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.