Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pts cellobiose transporter subunit iib | IM33_04410 | P69830 | + | 908237 - 908563 | 12198.3 |
| pts cellobiose transporter subunit iic | IM33_04415 | Not Available | + | 908602 - 909936 | 48480.1 |
| proline reductase | IM33_04420 | Not Available | + | 909947 - 910465 | 18940.1 |
| n(4)-(beta-n-acetylglucosaminyl)-l-asparaginase | IM33_04425 | Q47898 | + | 910559 - 911518 | 34969.8 |
| peptidase m20 | IM33_04430 | O34944 | + | 911564 - 912616 | 39670.6 |
| copper homeostasis protein | IM33_04435 | Q9NTM9 | + | 912619 - 913293 | 24874.2 |
| rna-binding protein | IM33_04440 | P74518 | + | 913862 - 914413 | 21272.4 |
| preprotein translocase subunit seca | IM33_04445 | Q18CN0 | + | 914545 - 917220 | 101457.0 |
| peptide chain release factor 2 | IM33_04450 | Q927Y4 | + | 917326 - 918342 | 38627.8 |
| hypothetical protein | IM33_04455 | O31489 | + | 918487 - 920628 | 80811.3 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.