Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| stage iii sporulation protein d | IM33_04360 | P15281 | + | 896669 - 896929 | 9958.2 |
| rod shape-determining protein mreb | IM33_04365 | Q01465 | + | 897125 - 898144 | 36051.0 |
| hydroxymyristoyl-acp dehydratase | IM33_04370 | Q18CL9 | + | 898161 - 898589 | 15900.9 |
| sporulation protein | IM33_04375 | P37521 | - | 898700 - 899209 | 18390.4 |
| s-adenosylmethionine synthetase | IM33_04380 | Q18CL7 | + | 899638 - 900831 | 43581.0 |
| membrane protein | IM33_04385 | Not Available | + | 901150 - 902247 | 39395.3 |
| atpase aaa | IM33_04390 | O34481 | + | 902511 - 904730 | 84007.8 |
| phosphoribosyl transferase | IM33_04395 | Not Available | + | 904733 - 905515 | 30711.2 |
| antitermination protein blgg | IM33_04400 | O31644 | + | 905859 - 907763 | 74482.0 |
| pts system cellobiose-specific transporter subunit iia | IM33_04405 | P46319 | + | 907904 - 908212 | 11749.4 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.