Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-asp | Not Available | Not Available | + | 877362 - 877438 | Not Available |
| Trna-gly | Not Available | Not Available | + | 877449 - 877523 | Not Available |
| Trna-arg | Not Available | Not Available | + | 877533 - 877606 | Not Available |
| membrane protein | IM33_04275 | Q45589 | + | 878554 - 879393 | 31498.7 |
| hypothetical protein | IM33_04280 | Not Available | + | 879390 - 880571 | 44366.2 |
| phosphate butyryltransferase | IM33_04285 | Q05624 | + | 880876 - 881778 | 32448.7 |
| butyrate kinase | IM33_04290 | Not Available | + | 881800 - 882879 | 38754.6 |
| atp-binding protein | IM33_04295 | Not Available | + | 882869 - 883546 | 25500.0 |
| 2-oxoacid:acceptor oxidoreductase | IM33_04300 | Not Available | + | 883589 - 883804 | 7689.49 |
| 2-ketoisovalerate ferredoxin oxidoreductase | IM33_04305 | Not Available | + | 883833 - 884912 | 39148.4 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.