Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | IM33_03970 | Not Available | + | 828917 - 829228 | 12306.5 |
| membrane protein | IM33_03975 | Not Available | + | 829256 - 829942 | 26484.5 |
| gntr family transcriptional regulator | IM33_03980 | P39796 | + | 830266 - 830979 | 27757.8 |
| trehalose permease iic protein | IM33_03985 | P39794 | - | 831032 - 832471 | 51861.8 |
| hypothetical protein | IM33_03990 | Not Available | + | 832741 - 833172 | 17145.3 |
| radical sam protein | IM33_04000 | A0Q2E1 | + | 834567 - 835691 | 43540.9 |
| hypothetical protein | IM33_04005 | Not Available | + | 835783 - 836565 | 28063.7 |
| pts glucose transporter subunit iia | IM33_04010 | Q814U8 | + | 836619 - 837131 | 18833.2 |
| hydrolase | IM33_04015 | O06724 | + | 837361 - 838245 | 32924.4 |
| 5-aminoimidazole-4-carboxamide ribonucleotide transformylase | IM33_04020 | P54113 | + | 838344 - 839519 | 43583.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.