Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase | IM33_03910 | O87392 | + | 815705 - 817147 | 53211.5 |
| beta-lactamase | IM33_03915 | Q57890 | + | 817467 - 818282 | 30545.7 |
| membrane protein | IM33_03920 | Not Available | + | 818881 - 820071 | 43682.6 |
| rna helicase | IM33_03935 | Q81DF9 | - | 821046 - 822173 | 42456.8 |
| trans-homoaconitate synthase | IM33_03940 | Q8RCF9 | + | 822618 - 823811 | 43873.6 |
| aconitate hydratase | IM33_03945 | Q54XS2 | + | 823836 - 825761 | 69280.0 |
| isocitrate dehydrogenase | IM33_03950 | Q9VWH4 | + | 825783 - 826778 | 36109.7 |
| marr family transcriptional regulator | IM33_03955 | P37503 | + | 827133 - 827582 | 17433.1 |
| acetyltransferase | IM33_03960 | Not Available | + | 827616 - 828110 | 18994.8 |
| nad(p)h nitroreductase | IM33_03965 | O28017 | + | 828207 - 828728 | 20077.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.