Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cysteine protease | IM33_03850 | Not Available | + | 804373 - 806784 | 87279.5 |
| cell surface protein | IM33_03855 | Not Available | + | 807082 - 808659 | 57182.4 |
| phop family transcriptional regulator | IM33_03870 | Q9F868 | + | 809580 - 810272 | 26310.9 |
| histidine kinase | IM33_03875 | Not Available | + | 810275 - 811204 | 35282.1 |
| bacitracin abc transporter atp-binding protein | IM33_03880 | Not Available | + | 811352 - 812275 | 34035.4 |
| lantibiotic abc transporter permease | IM33_03885 | Not Available | + | 812268 - 813029 | 27993.7 |
| lantibiotic abc transporter permease | IM33_03890 | Not Available | + | 813038 - 813820 | 28670.0 |
| rubrerythrin | IM33_03895 | Q9AGG3 | + | 814199 - 814735 | 20587.1 |
| fur family transcriptional regulator | IM33_03900 | Not Available | + | 814766 - 815155 | 14835.6 |
| desulfoferrodoxin | IM33_03905 | O29425 | + | 815192 - 815578 | 14081.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.