Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydroxymethylglutaryl-coa lyase | IM33_03630 | O34873 | + | 754084 - 754980 | 33025.9 |
| membrane protein | IM33_03635 | Not Available | + | 755077 - 756339 | 43709.7 |
| carnitine dehydratase | IM33_03640 | A9X6P9 | + | 756415 - 757608 | 43486.6 |
| enoyl-coa hydratase | IM33_03645 | P52046 | + | 758197 - 758991 | 28880.3 |
| permease | IM33_03650 | Not Available | + | 759084 - 760424 | 46322.1 |
| coa-transferase | IM33_03655 | Not Available | + | 760562 - 761794 | 45117.5 |
| acyl-coa dehydrogenase | IM33_03660 | G3KIM8 | + | 761834 - 762976 | 40843.4 |
| electron transfer flavoprotein subunit beta | IM33_03665 | P97089 | + | 762987 - 763781 | 28720.8 |
| electron transfer flavoprotein subunit alpha | IM33_03670 | H6LGM8 | + | 763792 - 764814 | 36992.0 |
| hypothetical protein | IM33_03675 | Not Available | + | 764913 - 765323 | 15675.8 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.