Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| metal-binding protein | IM33_03580 | Not Available | - | 746104 - 746364 | 10074.1 |
| gtp-binding protein hflx | IM33_03585 | Not Available | + | 746581 - 747864 | 48460.6 |
| hypothetical protein | IM33_03590 | Not Available | + | 747872 - 748549 | 26674.2 |
| nudix hydrolase | IM33_03595 | Not Available | + | 748635 - 749078 | 16547.1 |
| hypothetical protein | IM33_03600 | P32437 | + | 749386 - 750030 | 24123.9 |
| permease | IM33_03605 | Not Available | - | 750116 - 750493 | 13105.0 |
| permease | IM33_03610 | Not Available | - | 750493 - 750879 | 13840.5 |
| nad synthetase | IM33_03615 | A8MHN7 | + | 751058 - 751813 | 28012.6 |
| transcriptional regulator | IM33_03620 | Q189Y9 | + | 751896 - 752618 | 26189.6 |
| laci family transcriptional regulator | IM33_03625 | Not Available | - | 752813 - 753817 | 37196.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.