Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| anti-anti-sigma factor | IM33_03480 | O32720 | + | 718002 - 718337 | 12646.2 |
| anti-sigma f factor | IM33_03485 | Q0TNR1 | + | 718351 - 718779 | 15774.9 |
| sporulation sigma factor sigg | IM33_03490 | P07860 | + | 718802 - 719566 | 29102.5 |
| stage v sporulation protein ac | IM33_03495 | P40868 | + | 719833 - 720270 | 15514.4 |
| stage v sporulation protein ad | IM33_03500 | P40869 | + | 720437 - 721450 | 36240.6 |
| stage v sporulation protein aeb | IM33_03505 | Not Available | + | 721463 - 721825 | 12772.2 |
| rna polymerase sigma factor, sigma-70 family protein | IM33_03510 | Not Available | + | 722494 - 723045 | 22079.3 |
| hypothetical protein | IM33_03515 | Not Available | + | 723858 - 724073 | 8559.6 |
| peptidase c80 | IM33_03520 | P16154 | + | 724401 - 732317 | 299984.0 |
| laci family transcriptional regulator | IM33_03525 | Not Available | + | 732514 - 733530 | 38811.3 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.