Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyruvate formate lyase-activating enzyme 1 | IM33_03425 | P43751 | - | 703581 - 704315 | 27563.1 |
| formate acetyltransferase | IM33_03430 | Q2FK44 | - | 704475 - 706706 | 83510.4 |
| sodium:calcium antiporter | IM33_03435 | Q57556 | + | 707066 - 708061 | 36188.1 |
| rna helicase | IM33_03440 | P96614 | + | 708152 - 709765 | 60660.7 |
| antitermination protein blgg | IM33_03445 | Not Available | + | 710041 - 712026 | 76957.1 |
| sorbitol operon activator protein (glucitol) | IM33_03450 | Not Available | + | 712031 - 712465 | 16256.2 |
| pts system glucitol/sorbitol-specific transporter subunit iic | IM33_03455 | Not Available | + | 712493 - 713053 | 20351.2 |
| pts sorbose transporter subunit iib | IM33_03465 | P59784 | + | 714117 - 714482 | 13650.3 |
| sorbitol-6-phosphate 2-dehydrogenase | IM33_03470 | P05707 | + | 714583 - 715356 | 28052.8 |
| hypothetical protein | IM33_03475 | P37519 | + | 715765 - 717915 | 82020.4 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.