Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase | IM33_03365 | O31626 | + | 685716 - 687782 | 80131.5 |
| amino acid abc transporter substrate-binding protein | IM33_03370 | P54535 | + | 688592 - 689407 | 29594.8 |
| arginine abc transporter permease | IM33_03375 | Q1RHC0 | + | 689435 - 690112 | 24543.7 |
| peptide abc transporter atp-binding protein | IM33_03380 | O34677 | + | 690171 - 690893 | 26587.7 |
| cysteine desulfurase | IM33_03385 | A7FWJ9 | + | 691540 - 692691 | 42608.4 |
| thiamine biosynthesis protein thii | IM33_03390 | Q189U8 | + | 692736 - 693911 | 44286.8 |
| camphor resistance protein crcb | IM33_03395 | Q0TRL0 | + | 693950 - 694324 | 13572.1 |
| ferrous iron transporter a | IM33_03400 | Not Available | + | 694371 - 695174 | 29925.4 |
| reductase | IM33_03405 | Not Available | + | 695426 - 696067 | 23659.3 |
| hypothetical protein | IM33_03410 | Not Available | + | 697065 - 698768 | 61269.2 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.