Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin | IM33_03265 | P0DX10 | + | 663773 - 665701 | 71558.9 |
| radical sam protein | IM33_03270 | Not Available | + | 665726 - 666598 | 33100.4 |
| radical sam protein | IM33_03275 | Not Available | + | 666595 - 667533 | 35886.1 |
| octanoyltransferase | IM33_03280 | Q189T1 | + | 667580 - 668395 | 31249.4 |
| rna-binding protein | IM33_03285 | Not Available | + | 668545 - 668736 | 7209.84 |
| hypothetical protein | IM33_03290 | Not Available | + | 668755 - 669171 | 14447.0 |
| zinc transporter | IM33_03295 | Not Available | + | 669187 - 669537 | 13932.0 |
| histidinol phosphatase | IM33_03300 | Q9K801 | + | 669882 - 670661 | 30089.6 |
| hypothetical protein | IM33_03305 | Not Available | - | 670914 - 671795 | 34025.6 |
| hypothetical protein | IM33_03310 | Not Available | + | 672349 - 672861 | 19525.3 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.