Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methenyltetrahydrofolate cyclohydrolase | IM33_03215 | Q189R8 | + | 653042 - 653914 | 31234.1 |
| 5,10-methylenetetrahydrofolate reductase | IM33_03220 | Not Available | + | 653951 - 654625 | 24261.3 |
| methylenetetrahydrofolate reductase | IM33_03225 | O06745 | + | 654661 - 655542 | 31570.6 |
| pyridine nucleotide-disulfide oxidoreductase | IM33_03230 | P54533 | + | 655586 - 656971 | 49179.9 |
| carbon monoxide dehydrogenase | IM33_03235 | Q58098 | + | 657027 - 657797 | 28267.3 |
| acetyl-coa synthase subunit delta | IM33_03240 | Q07341 | + | 657817 - 658761 | 33722.2 |
| acetyl-coa synthase subunit gamma | IM33_03245 | Q07340 | + | 658792 - 660159 | 49983.7 |
| carbon monoxide dehydrogenase | IM33_03250 | Q46389 | + | 660209 - 661015 | 29371.8 |
| bifunctional acetyl-coa decarbonylase/synthase complex subunit alpha/beta | IM33_03255 | P27988 | + | 661072 - 663198 | 76606.2 |
| glycine cleavage system protein h | IM33_03260 | Q189S4 | + | 663285 - 663662 | 14047.4 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.