Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protease | IM33_03115 | Not Available | + | 624985 - 627522 | 96149.1 |
| phosphohydrolase | IM33_03120 | Not Available | + | 627626 - 628204 | 21755.1 |
| dna mismatch repair protein mutt | IM33_03125 | P59659 | + | 628238 - 628714 | 18612.0 |
| reductase | IM33_03130 | Not Available | + | 629118 - 629939 | 31012.8 |
| diguanylate kinase | IM33_03135 | Not Available | + | 630177 - 632675 | 96091.0 |
| aminoacyl-histidine dipeptidase | IM33_03140 | P15288 | - | 632853 - 634304 | 52542.1 |
| recombination and dna strand exchange inhibitor protein | IM33_03145 | Q189Q3 | + | 634624 - 637002 | 88247.1 |
| hypothetical protein | IM33_03150 | Q45584 | + | 637047 - 637460 | 14912.1 |
| arginyl-trna synthetase | IM33_03155 | Q189Q7 | + | 637628 - 639328 | 64973.9 |
| hypothetical protein | IM33_03160 | Not Available | + | 639582 - 640505 | 35836.6 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.