Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_03010 | Q47141 | - | 602304 - 603182 | 33597.0 |
| abc transporter | IM33_03015 | P54718 | + | 603450 - 605186 | 64502.2 |
| abc transporter | IM33_03020 | Not Available | + | 605186 - 607045 | 69381.2 |
| short-chain dehydrogenase | IM33_03025 | Not Available | + | 607222 - 608001 | 29173.0 |
| hypothetical protein | IM33_03030 | Not Available | + | 608278 - 608661 | 14294.4 |
| abc transporter atp-binding protein | IM33_03035 | O34641 | + | 608654 - 609526 | 32649.1 |
| hypothetical protein | IM33_03040 | Not Available | + | 609523 - 610173 | 24188.9 |
| transposase | IM33_03050 | Not Available | - | 610490 - 611371 | 35159.3 |
| hypothetical protein | IM33_03055 | Not Available | - | 611368 - 611688 | 12649.6 |
| merr family transcriptional regulator | IM33_03060 | Not Available | - | 611839 - 612657 | 31284.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.