Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydrolase | IM33_02805 | A6X391 | - | 553307 - 554446 | 42502.3 |
| anion transporter | IM33_02810 | Q57048 | - | 554483 - 555895 | 51275.5 |
| hypothetical protein | IM33_02815 | Not Available | - | 556389 - 556658 | 10153.1 |
| multidrug abc transporter permease | IM33_02820 | Not Available | - | 557291 - 558028 | 27550.8 |
| multidrug abc transporter permease | IM33_02825 | Not Available | - | 558040 - 558801 | 28973.6 |
| bacitracin abc transporter atp-binding protein | IM33_02830 | Not Available | - | 558801 - 559715 | 34228.3 |
| dna-binding protein | IM33_02835 | P94504 | + | 559891 - 560598 | 26722.8 |
| histidine kinase | IM33_02840 | Not Available | + | 560627 - 562033 | 52968.1 |
| beta-lactamase | IM33_02845 | Not Available | + | 563120 - 563509 | 15364.8 |
| glyoxalase | IM33_02850 | Not Available | + | 564036 - 564506 | 18459.8 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.