Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | IM33_02695 | Not Available | + | 530855 - 531160 | 11114.0 |
| luxr family transcriptional regulator | IM33_02700 | Not Available | + | 531752 - 532441 | 26343.8 |
| histidine kinase | IM33_02705 | Not Available | + | 532441 - 533358 | 34949.1 |
| bacitracin abc transporter atp-binding protein | IM33_02710 | Not Available | + | 533431 - 534357 | 35013.5 |
| lantibiotic abc transporter permease | IM33_02715 | Not Available | + | 534354 - 535034 | 25949.0 |
| fic family protein | IM33_02720 | Not Available | + | 535478 - 536179 | 27146.5 |
| gntr family transcriptional regulator | IM33_02725 | Not Available | + | 536767 - 537414 | 25123.5 |
| peptidase s9 | IM33_02730 | Not Available | + | 537562 - 539628 | 78237.0 |
| peptidase s9 | IM33_02735 | P39839 | + | 539647 - 541602 | 74303.6 |
| permease | IM33_02740 | Not Available | + | 541618 - 542808 | 42743.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.