Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydrolase | IM33_02410 | Not Available | - | 472453 - 473022 | 21776.3 |
| transporter | IM33_02415 | Not Available | - | 473183 - 474433 | 45262.6 |
| hypothetical protein | IM33_02420 | Not Available | - | 474442 - 474675 | 8885.68 |
| tetr family transcriptional regulator | IM33_02425 | Not Available | - | 474726 - 475304 | 22689.3 |
| glyceraldehyde-3-phosphate dehydrogenase | IM33_02430 | Q3C1A6 | + | 475607 - 477067 | 53246.4 |
| tetr family transcriptional regulator | IM33_02435 | Not Available | + | 477468 - 478073 | 23192.1 |
| pyruvate phosphate dikinase | IM33_02440 | O34796 | + | 478076 - 480643 | 95393.4 |
| flagellar protein flis | IM33_02450 | Not Available | - | 480903 - 482987 | 80920.2 |
| diguanylate cyclase | IM33_02455 | Not Available | - | 483035 - 483916 | 34225.3 |
| diguanylate cyclase | IM33_02460 | Q57N14 | - | 484266 - 485447 | 46153.2 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.