Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| beta-carotene 15,15'-monooxygenase | IM33_02260 | Not Available | + | 435969 - 436766 | 29462.1 |
| blai family transcriptional regulator | IM33_02265 | O54281 | + | 436994 - 437353 | 13669.7 |
| penicillin-binding protein | IM33_02270 | Not Available | + | 437364 - 438749 | 52485.0 |
| hypothetical protein | IM33_02275 | Not Available | + | 438982 - 439392 | 15107.1 |
| membrane protein | IM33_02280 | Not Available | + | 440484 - 441140 | 23971.1 |
| peptidoglycan-binding protein | IM33_02285 | Not Available | - | 441590 - 442861 | 47428.9 |
| protease prsw | IM33_02290 | Q188Z4 | + | 443094 - 443804 | 27537.2 |
| methylase | IM33_02295 | Q5SII2 | + | 443882 - 445192 | 50398.3 |
| signal peptidase | IM33_02300 | P42668 | + | 445292 - 445828 | 20193.7 |
| signal peptidase | IM33_02305 | Not Available | + | 445993 - 446529 | 20467.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.