Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein chew | IM33_02210 | Not Available | + | 425385 - 425903 | 19914.4 |
| diguanylate cyclase | IM33_02215 | Q9A5I5 | + | 426039 - 426998 | 36267.1 |
| chemotaxis protein | IM33_02220 | Q02929 | + | 427024 - 428727 | 62094.3 |
| chemotaxis protein chea | IM33_02225 | Q56310 | + | 428805 - 430910 | 79962.5 |
| chemotaxis protein | IM33_02230 | P0A966 | + | 430923 - 431363 | 16656.4 |
| chemotaxis protein cher | IM33_02235 | O51069 | + | 431399 - 432202 | 31795.3 |
| chemotaxis protein cheb | IM33_02240 | Q0AXB7 | + | 432242 - 432823 | 20979.6 |
| hypothetical protein | IM33_02245 | Not Available | + | 432944 - 433807 | 33342.8 |
| ornithine cyclodeaminase | IM33_02250 | Q63FA5 | + | 433874 - 434863 | 35559.9 |
| hypothetical protein | IM33_02255 | Not Available | + | 434957 - 435568 | 23045.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.