Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| regulator | IM33_02045 | A7WWQ5 | + | 383311 - 383958 | 24869.3 |
| histidine kinase | IM33_02050 | Q8E3C7 | + | 383951 - 385345 | 54136.7 |
| chemotaxis protein chey | IM33_02065 | Q8FFE0 | + | 388972 - 389682 | 27704.0 |
| histidine kinase | IM33_02070 | Not Available | + | 389676 - 390995 | 50990.8 |
| hypothetical protein | IM33_02075 | Not Available | + | 391391 - 393940 | 96287.1 |
| abc transporter atp-binding protein | IM33_02080 | Not Available | + | 394175 - 394849 | 25352.7 |
| d-alanyl-d-alanine carboxypeptidase | IM33_02090 | Not Available | - | 395227 - 396471 | 46009.8 |
| transcriptional antiterminator | IM33_02095 | Not Available | - | 396514 - 399348 | 106742.0 |
| membrane protein | IM33_02100 | Not Available | + | 400027 - 400788 | 27416.8 |
| membrane protein | IM33_02105 | Not Available | + | 400789 - 401283 | 18255.9 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.