Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | IM33_01995 | P23545 | - | 374153 - 375313 | 44414.9 |
| transcriptional regulator | IM33_02000 | Q2FY79 | - | 375301 - 375975 | 26285.6 |
| carbon-nitrogen hydrolase | IM33_02005 | Q4VBV9 | - | 376474 - 377301 | 30929.4 |
| membrane protein | IM33_02010 | Q8D1E4 | + | 377682 - 378002 | 11539.7 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | IM33_02015 | Q895U7 | - | 378135 - 378815 | 25191.1 |
| iditol 2-dehydrogenase | IM33_02020 | P0A9S4 | + | 379207 - 380259 | 38328.6 |
| pts mannose transporter subunit iid | IM33_02025 | Not Available | + | 380310 - 380726 | 15157.7 |
| pts mannose transporter subunit iid | IM33_02030 | P26380 | + | 380755 - 381228 | 17182.2 |
| pts n-acetylgalactosamine transporter subunit iid | IM33_02035 | Not Available | + | 381272 - 382030 | 27047.0 |
| pts n-acetylglucosamine transporter subunit iiabc | IM33_02040 | Not Available | + | 382054 - 382893 | 30224.6 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.