Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | IM33_01830 | P39664 | - | 342911 - 344092 | 44854.8 |
| regulator | IM33_01835 | O06978 | - | 344092 - 344754 | 25068.5 |
| tetr family transcriptional regulator | IM33_01840 | Not Available | - | 344887 - 345420 | 20792.3 |
| hydrolase | IM33_01845 | Not Available | + | 345706 - 346311 | 23008.3 |
| padr family transcriptional regulator | IM33_01850 | Not Available | + | 346412 - 347134 | 28381.6 |
| abc transporter | IM33_01855 | P94440 | + | 347239 - 347997 | 28568.5 |
| membrane protein | IM33_01860 | Not Available | + | 348002 - 348742 | 27865.5 |
| membrane protein | IM33_01865 | Not Available | + | 348742 - 349794 | 40107.8 |
| transcriptional regulator | IM33_01870 | P54717 | + | 349962 - 350711 | 29246.3 |
| transcriptional regulator | IM33_01875 | Not Available | + | 350708 - 351472 | 30074.7 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.