Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sodium:proton antiporter | IM33_01780 | P27611 | + | 328509 - 329930 | 50235.4 |
| transcriptional regulator | IM33_01785 | Not Available | + | 330234 - 330698 | 17672.5 |
| glyoxalase | IM33_01790 | Not Available | + | 330920 - 331276 | 13639.5 |
| multidrug transporter mate | IM33_01795 | Not Available | - | 331539 - 332861 | 48684.8 |
| lysr family transcriptional regulator | IM33_01800 | Not Available | + | 332982 - 333878 | 34695.9 |
| arac family transcriptional regulator | IM33_01805 | Q56143 | + | 334008 - 334868 | 33577.8 |
| helicase | IM33_01810 | O32215 | + | 335060 - 337174 | 81526.4 |
| beta-lactamase | IM33_01815 | Q5HK32 | + | 338096 - 339031 | 35647.6 |
| peptide abc transporter atp-binding protein | IM33_01820 | Q11SW8 | + | 339379 - 340062 | 25391.9 |
| abc transporter permease | IM33_01825 | Not Available | + | 340059 - 342719 | 100001.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.