Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-phe | Not Available | Not Available | + | 4212784 - 4212859 | Not Available |
| Trna-met | Not Available | Not Available | + | 4212867 - 4212943 | Not Available |
| hypothetical protein | IM33_20085 | Not Available | - | 4213265 - 4214185 | 35224.1 |
| conjugal transfer protein trag | IM33_20095 | Not Available | - | 4214506 - 4215391 | 33086.0 |
| n-acetylmuramoyl-l-alanine amidase | IM33_20100 | Q02114 | - | 4215392 - 4216000 | 22111.2 |
| transposase | IM33_20105 | Not Available | + | 4216004 - 4216650 | 25383.8 |
| transposase | IM33_20110 | O05086 | + | 4216938 - 4217359 | 15827.1 |
| Trna-trp | Not Available | Not Available | + | 4217442 - 4217517 | Not Available |
| Trna-met | Not Available | Not Available | + | 4217526 - 4217602 | Not Available |
| Trna-pro | Not Available | Not Available | + | 4217607 - 4217683 | Not Available |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.