Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | + | 4204702 - 4204778 | Not Available |
| conjugal transfer protein | IM33_19990 | Not Available | + | 4205062 - 4205544 | 17863.9 |
| hypothetical protein | IM33_20000 | Not Available | + | 4205659 - 4205963 | 11268.3 |
| hypothetical protein | IM33_20010 | Not Available | + | 4207612 - 4207959 | 13331.7 |
| membrane protein | IM33_20025 | Not Available | + | 4208902 - 4209132 | 8694.71 |
| holin | IM33_20030 | Not Available | + | 4209152 - 4209409 | 9495.04 |
| cell wall hydrolase | IM33_20035 | Not Available | + | 4209409 - 4210206 | 29423.4 |
| penicillin-binding protein | IM33_20040 | Not Available | + | 4210363 - 4211843 | 55624.0 |
| Trna-pro | Not Available | Not Available | + | 4212621 - 4212697 | Not Available |
| Trna-ile | Not Available | Not Available | + | 4212704 - 4212780 | Not Available |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.