Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cystathionine gamma-lyase | IM33_01730 | Q7MX71 | + | 315779 - 316969 | 44175.9 |
| hypothetical protein | IM33_01735 | Not Available | + | 317275 - 318459 | 45696.2 |
| atpase aaa | IM33_01740 | P38022 | + | 318807 - 320207 | 53775.3 |
| dihydrodipicolinate reductase | IM33_01745 | E3PY99 | + | 320473 - 321540 | 38599.1 |
| 2-amino-4-ketopentanoate thiolase | IM33_01750 | E3PY98 | + | 321640 - 321948 | 11525.0 |
| 2-amino-4-ketopentanoate thiolase | IM33_01755 | E3PY97 | + | 321941 - 323371 | 52265.5 |
| ornithine aminomutase | IM33_01760 | E3PY96 | + | 323449 - 323823 | 14168.2 |
| luxr family transcriptional regulator | IM33_01765 | E3PY95 | + | 323817 - 326021 | 82567.6 |
| hypothetical protein | IM33_01770 | Q05491 | + | 326021 - 327430 | 51770.8 |
| alanine racemase | IM33_01775 | C1FW08 | + | 327415 - 328479 | 39917.8 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.