Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pts cellbiose transporter subunit iic | IM33_19730 | P39584 | - | 4168198 - 4169499 | 47549.8 |
| gntr family transcriptional regulator | IM33_19735 | Not Available | - | 4169720 - 4170421 | 27518.8 |
| hypothetical protein | IM33_19740 | Not Available | - | 4170634 - 4170951 | 11823.3 |
| pts mannose transporter subunit iib | IM33_19745 | Not Available | - | 4170999 - 4171307 | 11261.9 |
| 50s rrna methyltransferase | IM33_19750 | Q181Q1 | - | 4171459 - 4171938 | 18086.3 |
| diguanylate phosphodiesterase | IM33_19755 | Not Available | - | 4172011 - 4174107 | 78738.1 |
| metallohydrolase | IM33_19760 | C0SP91 | - | 4174120 - 4174917 | 29465.2 |
| peptidase m1 | IM33_19765 | Not Available | - | 4175002 - 4176465 | 56873.5 |
| dna replication protein dnad | IM33_19770 | Not Available | + | 4176590 - 4177648 | 41454.2 |
| dna replication protein dnac | IM33_19775 | Not Available | + | 4177657 - 4178649 | 38156.7 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.