Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fmn reductase | IM33_19675 | Not Available | - | 4155511 - 4156464 | 34812.9 |
| hypothetical protein | IM33_19680 | Not Available | - | 4156492 - 4157880 | 52096.3 |
| paclitaxel/taxanoid biosynthesis susceptibility protein ts1 | IM33_19690 | Not Available | + | 4159273 - 4160625 | 52953.3 |
| transposase | IM33_19695 | Not Available | + | 4160612 - 4161013 | 16146.8 |
| hypothetical protein | IM33_19700 | Not Available | - | 4161300 - 4162283 | 37065.1 |
| carbohydrate kinase | IM33_19705 | Not Available | - | 4162905 - 4163897 | 37612.8 |
| 2-dehydro-3-deoxyphosphooctonate aldolase | IM33_19710 | D0ZLR2 | - | 4163902 - 4164642 | 26628.2 |
| l-seryl-trna selenium transferase | IM33_19715 | D0ZLR3 | - | 4164707 - 4165816 | 40571.1 |
| dihydroorotase | IM33_19720 | Q837K0 | - | 4165834 - 4166967 | 42057.6 |
| pts-associated protein | IM33_19725 | Not Available | - | 4166969 - 4168063 | 42252.5 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.