Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin | IM33_19525 | Not Available | - | 4125417 - 4125605 | 6434.66 |
| amidohydrolase | IM33_19530 | Not Available | - | 4125711 - 4126895 | 44618.0 |
| abc transporter permease | IM33_19535 | O30305 | - | 4127036 - 4127953 | 33304.0 |
| abc transporter atp-binding protein | IM33_19540 | Q60350 | - | 4127975 - 4128703 | 26662.2 |
| hypothetical protein | IM33_19545 | Not Available | - | 4128879 - 4129079 | 7603.53 |
| glyoxalase | IM33_19550 | O31535 | - | 4129204 - 4129584 | 14835.8 |
| cation transporter | IM33_19555 | P76352 | - | 4129857 - 4131215 | 49175.9 |
| hypothetical protein | IM33_19560 | Not Available | + | 4131671 - 4132123 | 17336.9 |
| hypothetical protein | IM33_19565 | Not Available | - | 4132281 - 4132898 | 23894.8 |
| merr family transcriptional regulator | IM33_19570 | Not Available | - | 4133232 - 4134044 | 31713.4 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.