Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rpir family transcriptional regulator | IM33_01650 | Not Available | - | 305108 - 305929 | 31622.5 |
| hypothetical protein | IM33_01655 | Not Available | - | 305990 - 307489 | 58698.4 |
| pts lactose transporter subunit iib | IM33_01660 | Q45399 | - | 307489 - 307785 | 10746.3 |
| pts dihydroxyacetone transporter | IM33_01665 | Q45402 | - | 307785 - 308096 | 11920.6 |
| hypothetical protein | IM33_01670 | Not Available | - | 308111 - 308872 | 29483.1 |
| pts lactose transporter subunit iic | IM33_01675 | O05507 | - | 308869 - 310131 | 45748.0 |
| n-acetylmannosamine-6-phosphate 2-epimerase | IM33_01680 | O51589 | - | 310136 - 310819 | 24943.6 |
| hypothetical protein | IM33_01690 | Not Available | + | 311397 - 311633 | 9425.37 |
| nadph-dependent fmn reductase | IM33_01700 | Not Available | - | 312414 - 312989 | 21893.1 |
| l-rhamnose mutarotase | IM33_01710 | A9KN28 | - | 313928 - 314242 | 12598.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.