Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphonate c-p lyase system protein phnk | IM33_19105 | P16678 | - | 4045907 - 4046773 | 32471.4 |
| carbon-phosphorus lyase complex subunit phnj | IM33_19110 | P16688 | - | 4046766 - 4047635 | 33317.5 |
| carbon-phosphorus lyase | IM33_19115 | O69067 | - | 4047655 - 4048740 | 41038.7 |
| phosphonate metabolism protein phnh | IM33_19120 | Not Available | - | 4048743 - 4049318 | 21887.2 |
| phosphonate metabolism protein phng | IM33_19125 | Not Available | - | 4049333 - 4049764 | 16342.6 |
| hydrolase tatd | IM33_19130 | P37545 | - | 4050109 - 4050879 | 29244.6 |
| methionine--trna ligase | IM33_19135 | Q8RDD1 | - | 4050909 - 4052846 | 74147.7 |
| spore maturation protein | IM33_19140 | P35158 | - | 4053242 - 4053763 | 18874.9 |
| spore maturation protein | IM33_19145 | Not Available | - | 4053779 - 4054363 | 21505.4 |
| nicotinate phosphoribosyltransferase | IM33_19150 | O32090 | + | 4054495 - 4055925 | 53776.8 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.