Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein | IM33_19000 | P22609 | - | 4022755 - 4023963 | 45267.3 |
| type ii secretion system protein e | IM33_19005 | Q1D098 | - | 4023975 - 4025651 | 62794.2 |
| pilin | IM33_19010 | Not Available | - | 4025796 - 4026281 | 17488.3 |
| ribose-phosphate pyrophosphokinase | IM33_19020 | Q8XHJ4 | - | 4027367 - 4028317 | 34229.6 |
| bifunctional n-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase | IM33_19025 | Q181B4 | - | 4028412 - 4029791 | 50341.5 |
| septation protein spovg | IM33_19030 | Q181B5 | - | 4030004 - 4030282 | 10461.8 |
| laci family transcriptional regulator | IM33_19035 | P37551 | - | 4030437 - 4031315 | 32466.4 |
| udp-n-acetylmuramate--alanine ligase | IM33_19040 | Q181B7 | + | 4031534 - 4032886 | 50228.6 |
| hypothetical protein | IM33_19045 | Not Available | - | 4033030 - 4033827 | 31398.7 |
| cation transporter | IM33_19050 | Q57891 | - | 4033897 - 4034793 | 32295.5 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.