Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp synthase subunit b | IM33_18795 | Q180X1 | - | 3983921 - 3984418 | 18896.8 |
| atp synthase subunit c | IM33_18800 | Q180X0 | - | 3984541 - 3984801 | 8321.25 |
| atp synthase f0 subunit a | IM33_18805 | O05097 | - | 3984871 - 3985575 | 25999.9 |
| atp synthase subunit i | IM33_18810 | Not Available | - | 3985578 - 3985964 | 13957.0 |
| atp synthase | IM33_18815 | Not Available | - | 3985969 - 3986196 | 8265.64 |
| cytidine deaminase | IM33_18820 | O43012 | - | 3986381 - 3986818 | 16295.8 |
| molybdenum hydroxylase | IM33_18825 | Q46808 | - | 3987044 - 3987859 | 29543.2 |
| uracil phosphoribosyltransferase | IM33_18830 | Q180X8 | - | 3988168 - 3988797 | 22702.9 |
| ribose 5-phosphate isomerase | IM33_18835 | Not Available | - | 3988833 - 3989285 | 16266.5 |
| protein tyrosine phosphatase | IM33_18840 | P39155 | - | 3989302 - 3989751 | 16538.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.