Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| antitoxin | IM33_18745 | Not Available | - | 3975864 - 3976151 | 10885.9 |
| alanine racemase | IM33_18750 | Q890X1 | - | 3976184 - 3977341 | 43296.7 |
| hypothetical protein | IM33_18755 | Not Available | - | 3977356 - 3977946 | 22943.8 |
| hypothetical protein | IM33_18760 | Q58821 | - | 3977967 - 3978428 | 17255.2 |
| 4'-phosphopantetheinyl transferase | IM33_18765 | Q0TUE3 | - | 3978443 - 3978823 | 14456.6 |
| atp synthase subunit delta | IM33_18770 | A3DIN0 | - | 3979284 - 3979544 | 9347.32 |
| atp f0f1 synthase subunit beta | IM33_18775 | Q180W5 | - | 3979547 - 3980941 | 49824.0 |
| atp synthase f1 subunit gamma | IM33_18780 | A6TK64 | - | 3980954 - 3981832 | 32431.7 |
| atp f0f1 synthase subunit alpha | IM33_18785 | Q180W8 | - | 3981860 - 3983362 | 54639.7 |
| atp synthase subunit delta | IM33_18790 | Q180W9 | - | 3983379 - 3983924 | 20591.2 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.