Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar kinase | IM33_18695 | Q8XNK5 | - | 3966032 - 3966961 | 34265.7 |
| gntr family transcriptional regulator | IM33_18700 | O34817 | + | 3967232 - 3967957 | 28062.1 |
| n-acetylglucosamine-6-phosphate deacetylase | IM33_18705 | P96166 | + | 3968041 - 3969195 | 42361.6 |
| peptidase s41 | IM33_18710 | O34666 | - | 3969376 - 3970533 | 42373.1 |
| 5-formyltetrahydrofolate cyclo-ligase | IM33_18715 | Q8K9E3 | + | 3970686 - 3971255 | 21662.3 |
| hypothetical protein | IM33_18720 | Not Available | - | 3971426 - 3971842 | 15858.4 |
| membrane protein | IM33_18725 | O31674 | - | 3972060 - 3973154 | 38733.8 |
| transketolase | IM33_18730 | Not Available | - | 3973579 - 3974520 | 33776.0 |
| transketolase | IM33_18735 | Not Available | - | 3974513 - 3975340 | 29918.8 |
| pemk family transcriptional regulator | IM33_18740 | P96622 | - | 3975512 - 3975874 | 13314.2 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.