Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| threonine-phosphate decarboxylase | IM33_18590 | Q8R5U4 | - | 3944595 - 3945659 | 41369.8 |
| cobalamin biosynthesis protein cobd | IM33_18595 | Q8XLK2 | - | 3945691 - 3946662 | 36306.8 |
| cobyrinic acid a,c-diamide synthase | IM33_18600 | Q92CL7 | - | 3946663 - 3948039 | 51722.5 |
| cobalamin biosynthesis protein cobq | IM33_18605 | Q180T4 | - | 3948078 - 3949592 | 56659.5 |
| histidine phosphatase | IM33_18610 | Not Available | - | 3949953 - 3950567 | 23460.0 |
| cobalamin synthase | IM33_18615 | Q180T5 | - | 3950587 - 3951360 | 29111.6 |
| cobinamide kinase | IM33_18620 | P0AE77 | - | 3951370 - 3951930 | 21699.1 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | IM33_18625 | Q180T6 | - | 3951962 - 3953008 | 37342.4 |
| evolved beta-galactosidase beta-subunit | IM33_18630 | Not Available | + | 3953229 - 3953420 | 7532.6 |
| aldose epimerase | IM33_18640 | Not Available | + | 3953814 - 3954686 | 33703.8 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.