Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sirohydrochlorin cobaltochelatase | IM33_18540 | Q05592 | - | 3935851 - 3937341 | 56129.2 |
| cobalt-precorrin-6a reductase | IM33_18545 | Q57972 | - | 3937360 - 3938112 | 28125.3 |
| cobalt-precorrin-3b c(17)-methyltransferase | IM33_18550 | Q05590 | - | 3938109 - 3938834 | 26567.4 |
| cobalamin biosynthesis protein cbig | IM33_18555 | Q05631 | - | 3938831 - 3939952 | 41901.9 |
| cobalt-precorrin-4 c(11)-methyltransferase | IM33_18560 | P0A2H0 | - | 3939936 - 3940688 | 27933.5 |
| cobalt-precorrin-6y c(15)-methyltransferase | IM33_18565 | Q05632 | - | 3940681 - 3941256 | 21204.7 |
| cobalt-precorrin-6y c(5)-methyltransferase | IM33_18570 | P0A2H2 | - | 3941246 - 3941854 | 22807.7 |
| cobalt-precorrin-6a synthase | IM33_18575 | Q180S8 | - | 3941851 - 3943077 | 45469.0 |
| precorrin-8x methylmutase | IM33_18580 | Q05601 | - | 3943086 - 3943718 | 23359.3 |
| cobalamin biosynthesis protein | IM33_18585 | Q9XDM4 | - | 3943706 - 3944593 | 32947.9 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.