Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylenolpyruvoylglucosamine reductase | IM33_18380 | Q180P9 | - | 3905882 - 3906796 | 33419.5 |
| fdhc protein | IM33_18385 | O05399 | - | 3907069 - 3907839 | 26811.9 |
| cardiolipin synthase | IM33_18390 | P71040 | + | 3908157 - 3909638 | 56880.7 |
| nadh dehydrogenase | IM33_18395 | Q46505 | + | 3909956 - 3910453 | 18136.1 |
| nadh dehydrogenase | IM33_18400 | Q46507 | + | 3910470 - 3912356 | 67879.5 |
| nadh:ubiquinone oxidoreductase | IM33_18405 | Not Available | + | 3912379 - 3914160 | 64870.8 |
| mannonate oxidoreductase | IM33_18410 | Q3JYM3 | - | 3914363 - 3916159 | 67780.4 |
| serine kinase | IM33_18415 | Q93SG0 | - | 3916370 - 3917299 | 35579.3 |
| excinuclease abc subunit c | IM33_18420 | Q180Q8 | - | 3917299 - 3919116 | 70437.6 |
| excinuclease abc subunit a | IM33_18425 | Q8XNI5 | - | 3919376 - 3922201 | 104905.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.