Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_18315 | Not Available | - | 3891119 - 3891520 | 15109.2 |
| rna methyltransferase | IM33_18335 | Q8XNG6 | - | 3893462 - 3894820 | 50875.8 |
| pyruvate kinase | IM33_18340 | Q02499 | - | 3894995 - 3896755 | 63149.0 |
| 6-phosphofructokinase | IM33_18345 | Q180P4 | - | 3896807 - 3897766 | 34194.6 |
| dna polymerase iii subunit alpha | IM33_18350 | O51526 | - | 3897975 - 3901544 | 136285.0 |
| sporulation regulator whia | IM33_18355 | Q180P5 | - | 3901695 - 3902648 | 35584.4 |
| nudix hydrolase | IM33_18360 | Q75UV1 | - | 3902665 - 3903090 | 16424.7 |
| hypothetical protein | IM33_18365 | P38541 | - | 3903159 - 3904265 | 40702.7 |
| glmz(srna)-inactivating ntpase | IM33_18370 | Q180P8 | - | 3904277 - 3905134 | 32756.8 |
| phosphoesterase | IM33_18375 | B0K683 | - | 3905165 - 3905878 | 26993.2 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.